MolNFT v2 · #151948 · protein
Crystal structure of deaminated P domain from norovirus strain Saga GII-4 in complex with Fuc
6H9V: “Crystal structure of deaminated P domain from norovirus strain Saga GII-4 in complex with Fuc”. X-ray diffraction at 1.52, 2 ligands (MFU, MG). MolNFT v2 #151948 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6H9V
- Type
- protein
- Length
- 612 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.52
- Source
- Norovirus Hu/GII-4/Saga4/2006/JP
- UniProt
- B5BTR7
- Ligands
- MFU, MG
Structure
x-ray diffraction · resolution 1.52 · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 309 | — | B5BTR7 |
| B | — | protein | 303 | — | B5BTR7 |
Ligands and binding sites
- MFU · methyl alpha-L-fucopyranoside · sugar · 2 copies · chains A, B
- MG · Magnesium ion · metal · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6H9V · Crystal structure of deaminated P domain from norovirus strain saga gii-4 in complex with… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B5BTR7
- Elsewhere: RCSB PDB 6H9V · PDBe 6H9V · UniProt B5BTR7
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