MolNFT v2 · #151581 · protein
Tandem GerMN domains of the sporulation protein GerM from Bacillus subtilis
6GZB: “Tandem GerMN domains of the sporulation protein GerM from Bacillus subtilis”. X-ray diffraction at 2.1. MolNFT v2 #151581 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6GZB
- Type
- protein
- Length
- 1,135 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.1
- Source
- Bacillus subtilis subsp. subtilis str. 168
- UniProt
- P39072
Structure
x-ray diffraction · resolution 2.1 · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 287 | — | P39072 |
| B | — | protein | 282 | — | P39072 |
| C | — | protein | 284 | — | P39072 |
| D | — | protein | 282 | — | P39072 |
Ligands and binding sites
- ACT · Acetate ion · additive · 10 copies · chains A, B, C, D
- EDO · 1,2-ethanediol · additive · 6 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6GZB · Tandem germn domains of the sporulation protein germ from bacillus subtilis · the same entry in another collection · chain D against D, TM-score 1.00
- P39072 · AlphaFold monomer V2.0 prediction for spore germination protein germ (P39072) · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P39072
- Elsewhere: RCSB PDB 6GZB · PDBe 6GZB · UniProt P39072
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