MolNFT v2 · #147506 · protein
Crystal structure of the SH2 domain from RavO (Lpg1129) from Legionella pneumophila in complex with Homo sapiens Shc1 phospho-Tyr317 peptide
6DM4: “Crystal structure of the SH2 domain from RavO (Lpg1129) from Legionella pneumophila in complex with Homo…”. X-ray diffraction at 1.9, 1 ligand (SO4). MolNFT v2 #147506 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6DM4
- Type
- protein
- Length
- 496 residues
- Chains
- 7
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.9
- Source
- Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 /…
- UniProt
- Q5ZWF6
- Ligands
- SO4
Structure
x-ray diffraction · resolution 1.9 · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D | — | protein | 119 | — | Q5ZWF6 |
| E, H | — | protein | 7 | — | — |
| G | — | protein | 6 | — | — |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 6 copies · chains A, C, B, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6DM4 · Crystal structure of the SH2 domain from ravo (LPG1129) from legionella pneumophila in… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5ZWF6
- Elsewhere: RCSB PDB 6DM4 · PDBe 6DM4 · UniProt Q5ZWF6
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