MolNFT v2 · #146875 · protein
FT_T dioxygenase with bound dichlorprop
6D3H: “FT_T dioxygenase with bound dichlorprop”. X-ray diffraction at 2.03, 4 ligands (FTV, AKG, CO). MolNFT v2 #146875 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6D3H
- Type
- protein
- Length
- 1,145 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.03
- Source
- Sphingobium herbicidovorans
- Ligands
- FTV, AKG, CO, CL
Structure
x-ray diffraction · resolution 2.03 · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, I | — | protein | 286 | — | — |
| M | — | protein | 287 | — | — |
Ligands and binding sites
- FTV · (2R)-2-(2,4-dichlorophenoxy)propanoic acid · ligand · 4 copies · chains A, B, I, M
- AKG · 2-oxoglutaric acid · ligand · 4 copies · chains A, B, I, M
- CO · Cobalt (II) ion · metal · 4 copies · chains A, B, I, M
- CL · Chloride ion · ion · 4 copies · chains A, B, I, M
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6D3H · FT_T dioxygenase with bound dichlorprop · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6D3H · PDBe 6D3H
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