MolNFT v2 · #145696 · protein
Staphylopine dehydrogenase (SaODH) - NADP+ bound
6C4T: “Staphylopine dehydrogenase (SaODH) - NADP+ bound”. X-ray diffraction at 2.49, 1 ligand (NA7). MolNFT v2 #145696 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6C4T
- Type
- protein
- Length
- 428 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.49
- Source
- Staphylococcus aureus
- UniProt
- A0A1Q4GXD5
- Ligands
- NA7
Structure
x-ray diffraction · resolution 2.49 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 428 | — | A0A1Q4GXD5 |
Ligands and binding sites
- NA7 · [(2R,3R,4R,5R)-5-(6-amino-9H-purin-9-yl)-3-hydroxy-4-(phosphonooxy)tetrahydrofuran-2-yl]methyl [(2R,3S,4S)-3,4-dihydroxytetrahydrofuran-2-yl]methyl dihydrogen diphosphate · ligand · chains A
- GOL · Glycerol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6C4T · Staphylopine dehydrogenase (saodh) - NADP+ bound · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A1Q4GXD5
- Elsewhere: RCSB PDB 6C4T · PDBe 6C4T · UniProt A0A1Q4GXD5
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