MolNFT v2 · #144981 · protein

TCR55 in complex with HIV(Pol448-456)/HLA-B35

6BJ3: “TCR55 in complex with HIV(Pol448-456)/HLA-B35”. X-ray diffraction at 1.898, 1 ligand (SO4). MolNFT v2 #144981 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6BJ3
Type: protein
Length: 826 residues
Chains: 5
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 1.898
Source: Homo sapiens; SYNTHETIC CONSTRUCT
UniProt: P30685, P61769, Q6IRV4, K7N5M4
Ligands: SO4

Structure

x-ray diffraction · resolution 1.898 · 5 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	275	—	P30685
B	—	protein	99	—	P61769
D	—	protein	202	—	Q6IRV4
H	—	protein	241	—	K7N5M4
C	—	protein	9	—	—

Ligands and binding sites

SO4 · Sulfate ion · ion · 5 copies · chains A, D, H
EDO · 1,2-ethanediol · additive · 3 copies · chains A, C, D, H

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6BJ3 · TCR55 in complex with HIV(POL448-456)/HLA-B35 · the same entry in another collection · chain A against A, TM-score 1.00
P61769 · AlphaFold monomer V2.0 prediction for beta-2-microglobulin (P61769) · a predicted model of the same protein · chain B against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P30685
Every structure of UniProt P61769
Every structure of UniProt Q6IRV4
Every structure of UniProt K7N5M4
Elsewhere: RCSB PDB 6BJ3 · PDBe 6BJ3 · UniProt P30685 · UniProt P61769 · UniProt Q6IRV4 · UniProt K7N5M4

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