MolNFT v2 · #143416 · protein
Crystal structure of the fifth immunoglobulin domain (Ig5) of human Robo1 in complex with the scFv fragment of murine monoclonal antibody B5209B
6A78: “Crystal structure of the fifth immunoglobulin domain (Ig5) of human Robo1 in complex with the scFv fragment…”. X-ray diffraction at 2.1, 1 ligand (SO4). MolNFT v2 #143416 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6A78
- Type
- protein
- Length
- 641 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.1
- Source
- Homo sapiens; Mus musculus
- UniProt
- Q9Y6N7
- Ligands
- SO4
Structure
x-ray diffraction · resolution 2.1 · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 90 | — | Q9Y6N7 |
| L | — | protein | 108 | — | — |
| H | — | protein | 121 | — | — |
| M | — | protein | 110 | — | — |
| I | — | protein | 122 | — | — |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 2 copies · chains L, H, M, I
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6A78 · Crystal structure of the fifth immunoglobulin domain (IG5) of human ROBO1 in complex with… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9Y6N7
- Elsewhere: RCSB PDB 6A78 · PDBe 6A78 · UniProt Q9Y6N7
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