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MolNFT v2 · #143109 · protein

Structure of GldA from E.coli

5ZXL: “Structure of GldA from E.coli”. X-ray diffraction at 2.794, 3 ligands (ZN, SO4, CL). MolNFT v2 #143109 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
5ZXL
Type
protein
Length
1,468 residues
Chains
4
Method
x-ray diffraction
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
2.794
Source
Escherichia coli (strain K12)
UniProt
P0A9S5
Ligands
ZN, SO4, CL

Structure

x-ray diffraction · resolution 2.794 · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A, B, C, D—protein367—P0A9S5

Ligands and binding sites

  • ZN · Zinc ion · metal · 5 copies · chains A, B, C, D
  • SO4 · Sulfate ion · ion · 5 copies · chains B, C, D
  • CL · Chloride ion · ion · chains D
  • GOL · Glycerol · additive · 12 copies · chains A, B, C, D

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5ZXL · Structure of glda from E.COLI · the same entry in another collection · chain D against D, TM-score 1.00
  • P0A9S5 · AlphaFold monomer V2.0 prediction for glycerol dehydrogenase (P0A9S5) · a predicted model of the same protein · chain B against A, TM-score 0.99

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