MolNFT v2 · #141646 · protein
Crystal Structure of LysM domain from pteris ryukyuensis chitinase A
5YLG: “Crystal Structure of LysM domain from pteris ryukyuensis chitinase A”. X-ray diffraction at 1.48, 1 ligand (ZN). MolNFT v2 #141646 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5YLG
- Type
- protein
- Length
- 188 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.48
- Source
- Pteris ryukyuensis
- UniProt
- Q0WYK2
- Ligands
- ZN
Structure
x-ray diffraction · resolution 1.48 · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 47 | — | Q0WYK2 |
| B | — | protein | 47 | — | Q0WYK2 |
| C | — | protein | 46 | — | Q0WYK2 |
| D | — | protein | 48 | — | Q0WYK2 |
Ligands and binding sites
- ZN · Zinc ion · metal · 3 copies · chains A, C, B, D
- EDO · 1,2-ethanediol · additive · 2 copies · chains A, B, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5YLG · Crystal structure of lysm domain from pteris ryukyuensis chitinase a · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q0WYK2
- Elsewhere: RCSB PDB 5YLG · PDBe 5YLG · UniProt Q0WYK2
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