MolNFT v2 · #141597 · protein
The complex structure of Rv3197-ADP from Mycobacterium tuberculosis
5YK0: “The complex structure of Rv3197-ADP from Mycobacterium tuberculosis”. X-ray diffraction at 2.102, 2 ligands (ADP, SO4). MolNFT v2 #141597 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5YK0
- Type
- protein
- Length
- 399 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.102
- Source
- Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
- UniProt
- O53343
- Ligands
- ADP, SO4
Structure
x-ray diffraction · resolution 2.102 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 399 | — | O53343 |
Ligands and binding sites
- ADP · Adenosine-5'-diphosphate · ligand · chains A
- SO4 · Sulfate ion · ion · 6 copies · chains A
- GOL · Glycerol · additive · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5YK0 · The complex structure of RV3197-ADP from mycobacterium tuberculosis · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O53343
- Elsewhere: RCSB PDB 5YK0 · PDBe 5YK0 · UniProt O53343
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