MolNFT v2 · #141221 · protein
Hapalindole U and DMSPP Bound AmbP3
5Y84: “Hapalindole U and DMSPP Bound AmbP3”. X-ray diffraction at 2, 2 ligands (8P6, DST). MolNFT v2 #141221 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5Y84
- Type
- protein
- Length
- 586 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2
- Source
- Fischerella ambigua UTEX 1903
- UniProt
- V5TDY7
- Ligands
- 8P6, DST
Structure
x-ray diffraction · resolution 2 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 293 | — | V5TDY7 |
Ligands and binding sites
- 8P6 · Hapalindole U · ligand · 2 copies · chains A, B
- DST · Dimethylallyl S-thiolodiphosphate · ligand · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5Y84 · Hapalindole U and dmspp bound AMBP3 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt V5TDY7
- Elsewhere: RCSB PDB 5Y84 · PDBe 5Y84 · UniProt V5TDY7
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