MolNFT v2 · #138883 · protein
Crystal structure of the A/Puerto Rico/8/1934 (H1N1) influenza virus hemagglutinin in complex with cyclic peptide CP141099 (P6)
5W6R: “Crystal structure of the A/Puerto Rico/8/1934 (H1N1) influenza virus hemagglutinin in complex with cyclic…”. X-ray diffraction at 2.731, 1 ligand (NAG). MolNFT v2 #138883 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5W6R
- Type
- protein
- Length
- 2,016 residues
- Chains
- 12
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.731
- Source
- Influenza A virus (A/Puerto Rico/8/1934(H1N1)); SYNTHETIC CONSTRUCT
- UniProt
- P03452
- Ligands
- NAG
Structure
x-ray diffraction · resolution 2.731 · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C, E, G | — | protein | 322 | — | P03452 |
| B, D, F, H | — | protein | 171 | — | P03452 |
| M, O, N, Q | — | protein | 11 | — | — |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 28 copies · chains A, B, C, D, E, F, G, H
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5W6R · Crystal structure of the A/PUERTO RICO/8/1934 (H1N1) influenza virus hemagglutinin in… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P03452
- Elsewhere: RCSB PDB 5W6R · PDBe 5W6R · UniProt P03452
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