MolNFT v2 · #138729 · protein
Crystal structure of TnmS3 in complex with tiancimycin (TNM B)
5W27: “Crystal structure of TnmS3 in complex with tiancimycin (TNM B)”. X-ray diffraction at 1.8, 1 ligand (9VG). MolNFT v2 #138729 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5W27
- Type
- protein
- Length
- 242 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.8
- Source
- Streptomyces sp. CB03234
- UniProt
- A0A125SA29
- Ligands
- 9VG
Structure
x-ray diffraction · resolution 1.8 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 121 | — | A0A125SA29 |
Ligands and binding sites
- 9VG · Methyl (2E)-3-[(1as,11s,11as,14z,18r)-3,18-dihydroxy-4, 9-dioxo-4,9,10,11-tetrahydro-11AH-11,1A-hept[3]ene[1, 5]diynonaphtho[2,3-h]oxireno[c]quinolin-11A-yl]but-2-enoate · ligand · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5W27 · Crystal structure of TNMS3 in complex with tiancimycin (tnm B) · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A125SA29
- Elsewhere: RCSB PDB 5W27 · PDBe 5W27 · UniProt A0A125SA29
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