MolNFT v2 · #136863 · protein
Influenza hemagglutinin in complex with a neutralizing antibody
5UGY: “Influenza hemagglutinin in complex with a neutralizing antibody”. X-ray diffraction at 2.801, 2 ligands (NAG, BMA). MolNFT v2 #136863 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5UGY
- Type
- protein
- Length
- 2,781 residues
- Chains
- 12
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.801
- Source
- Homo sapiens; Influenza A virus (A/Solomon Islands/3/2006(H1N1))
- UniProt
- A7UPX0, S6C4S0, Q8N355
- Ligands
- NAG, BMA
Structure
x-ray diffraction · resolution 2.801 · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C, E | — | protein | 323 | — | A7UPX0 |
| B, D, F | — | protein | 173 | — | A7UPX0 |
| H, I, J | — | protein | 221 | — | S6C4S0 |
| L, M, N | — | protein | 210 | — | Q8N355 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 24 copies · chains A, C, E
- BMA · beta-D-mannopyranose · sugar · 3 copies
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5UGY · Influenza hemagglutinin in complex with a neutralizing antibody · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A7UPX0
- Every structure of UniProt S6C4S0
- Every structure of UniProt Q8N355
- Elsewhere: RCSB PDB 5UGY · PDBe 5UGY · UniProt A7UPX0 · UniProt S6C4S0 · UniProt Q8N355
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