MolNFT v2 · #132741 · protein
PanDDA analysis group deposition -- Crystal Structure of NUDT5 in complex with FS-1169
5QTQ: “PanDDA analysis group deposition -- Crystal Structure of NUDT5 in complex with FS-1169”. X-ray diffraction at 1.82, 3 ligands (PWM, MG, CL). MolNFT v2 #132741 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5QTQ
- Type
- protein
- Length
- 776 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.82
- Source
- Homo sapiens
- UniProt
- Q9UKK9
- Ligands
- PWM, MG, CL
Structure
x-ray diffraction · resolution 1.82 · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 194 | — | Q9UKK9 |
| B | — | protein | 195 | — | Q9UKK9 |
| C | — | protein | 193 | — | Q9UKK9 |
| D | — | protein | 194 | — | Q9UKK9 |
Ligands and binding sites
- PWM · 5-fluoroquinazolin-4(3H)-one · ligand · 4 copies · chains A, B, C, D
- MG · Magnesium ion · metal · 8 copies · chains A, B, C, D
- CL · Chloride ion · ion · chains B
- EDO · 1,2-ethanediol · additive · 6 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5QTQ · Pandda analysis group deposition -- crystal structure of NUDT5 in complex with fs-1169 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9UKK9
- Elsewhere: RCSB PDB 5QTQ · PDBe 5QTQ · UniProt Q9UKK9
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