MolNFT v2 · #129957 · protein
YnDL in Complex with 5 amino acid (PGA) complex
5ONJ: “YnDL in Complex with 5 amino acid (PGA) complex”. X-ray diffraction at 1.7, 1 ligand (ZN). MolNFT v2 #129957 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5ONJ
- Type
- protein
- Length
- 208 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.7
- Source
- Bacillus subtilis; SYNTHETIC CONSTRUCT
- UniProt
- A0A164XNU3
- Ligands
- ZN
Structure
x-ray diffraction · resolution 1.7 · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 202 | — | A0A164XNU3 |
| D | — | protein | 6 | — | — |
Ligands and binding sites
- ZN · Zinc ion · metal · chains A, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5ONJ · Yndl in complex with 5 amino acid (pga) complex · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A164XNU3
- Elsewhere: RCSB PDB 5ONJ · PDBe 5ONJ · UniProt A0A164XNU3
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