MolNFT v2 · #129949 · protein
Drosophila Bag-of-marbles CBM peptide bound to human CAF40
5ONB: “Drosophila Bag-of-marbles CBM peptide bound to human CAF40”. X-ray diffraction at 3. MolNFT v2 #129949 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5ONB
- Type
- protein
- Length
- 1,165 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 3
- Source
- Homo sapiens; SYNTHETIC CONSTRUCT
- UniProt
- Q92600, P22745
Structure
x-ray diffraction · resolution 3 · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, G | — | protein | 270 | — | Q92600 |
| B, D | — | protein | 22 | — | P22745 |
| C | — | protein | 268 | — | Q92600 |
| E | — | protein | 269 | — | Q92600 |
| F | — | protein | 23 | — | P22745 |
| H | — | protein | 21 | — | P22745 |
Ligands and binding sites
- GOL · Glycerol · additive · chains G, H
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5ONB · Drosophila bag-of-marbles cbm peptide bound to human CAF40 · the same entry in another collection · chain H against H, TM-score 1.00
- Q92600 · AlphaFold monomer V2.0 prediction for CCR4-not transcription complex subunit 9 (Q92600) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q92600
- Every structure of UniProt P22745
- Elsewhere: RCSB PDB 5ONB · PDBe 5ONB · UniProt Q92600 · UniProt P22745
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