MolNFT v2 · #129158 · protein
GII.10 Vietnam 026 norovirus protruding domain in complex with Nanobody Nano-26 and Nano-85
5O04: “GII.10 Vietnam 026 norovirus protruding domain in complex with Nanobody Nano-26 and Nano-85”. X-ray diffraction at 2.3. MolNFT v2 #129158 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5O04
- Type
- protein
- Length
- 1,076 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.3
- Source
- Norwalk virus; Vicugna pacos
- UniProt
- Q5F4T5
Structure
x-ray diffraction · resolution 2.3 · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 308 | — | Q5F4T5 |
| B | — | protein | 315 | — | Q5F4T5 |
| E | — | protein | 112 | — | — |
| D | — | protein | 119 | — | — |
| F | — | protein | 101 | — | — |
| C | — | protein | 121 | — | — |
Ligands and binding sites
- EDO · 1,2-ethanediol · additive · 18 copies · chains A, B, E, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5O04 · GII.10 vietnam 026 norovirus protruding domain in complex with nanobody nano-26 and… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5F4T5
- Elsewhere: RCSB PDB 5O04 · PDBe 5O04 · UniProt Q5F4T5
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.