MolNFT v2 · #127711 · protein

Glycoside hydrolase BT_0996

5MT2 · Beta-galactosidase: “Glycoside hydrolase BT_0996”. X-ray diffraction at 1.41, 1 pocket (best druggability 0.63). MolNFT v2 #127711 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5MT2
Type: protein
Length: 352 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 1.41
Source: Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 /…
Molecule: Beta-galactosidase
UniProt: Q8A921
Pockets: 1 · best druggability 0.63

Structure

x-ray diffraction · resolution 1.41 · 1 distinct chain · 6% helix, 45% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Beta-galactosidase	protein	352	6% helix, 45% strand	Q8A921

Ligands and binding sites

GOL · Glycerol · additive · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	312	0.63	0.79	41	GOL

Modifications

Observed in the structure: 9 modified (engineered).

Compared structures

5MT2 · Glycoside hydrolase BT_0996 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8A921
Elsewhere: RCSB PDB 5MT2 · PDBe 5MT2 · UniProt Q8A921

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