MolNFT v2 · #126517 · protein
A quantum half-site enzyme
5LU5: “A quantum half-site enzyme”. X-ray diffraction at 1.55, 3 ligands (M7P, NA, MG). MolNFT v2 #126517 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5LU5
- Type
- protein
- Length
- 773 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.55
- Source
- Burkholderia pseudomallei
- UniProt
- A0A095TT41
- Ligands
- M7P, NA, MG
Structure
x-ray diffraction · resolution 1.55 · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C | — | protein | 193 | — | A0A095TT41 |
| D | — | protein | 194 | — | A0A095TT41 |
Ligands and binding sites
- M7P · 7-O-phosphono-D-glycero-alpha-D-manno-heptopyranose · sugar · 4 copies · chains A, B, D, C
- NA · Sodium ion · metal
- MG · Magnesium ion · metal
- PG4 · Tetraethylene glycol · additive · 4 copies · chains A, B, D, C
- GOL · Glycerol · additive · 4 copies · chains B
- PGE · Triethylene glycol · additive · 3 copies · chains A, C, D
- PEG · Di(hydroxyethyl)ether · additive · chains A
- ACT · Acetate ion · additive
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5LU5 · A quantum half-site enzyme · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A095TT41
- Elsewhere: RCSB PDB 5LU5 · PDBe 5LU5 · UniProt A0A095TT41
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