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MolNFT v2 · #126386 · protein

rat catechol O-methyltransferase at high pH in complex with a bisubstrate inhibitor

5LQA: “rat catechol O-methyltransferase at high pH in complex with a bisubstrate inhibitor”. X-ray diffraction at 1.2, 4 ligands (619, MG, SO4). MolNFT v2 #126386 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
5LQA
Type
protein
Length
213 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
1.2
Source
Rattus norvegicus
UniProt
P22734
Ligands
619, MG, SO4, CL

Structure

x-ray diffraction · resolution 1.2 · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein213—P22734

Ligands and binding sites

  • 619 · N-[(E)-3-[(2R,3S,4R,5R)-5-(6-ethylaminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]prop-2-enyl]-5-(4-fluorophenyl)-2,3-dihydroxy-benzamide · ligand · chains A
  • MG · Magnesium ion · metal · chains A
  • SO4 · Sulfate ion · ion · 2 copies · chains A
  • CL · Chloride ion · ion · 2 copies · chains A
  • NHE · 2-[N-cyclohexylamino]ethane sulfonic acid · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5LQA · Rat catechol O-methyltransferase at high pH in complex with a bisubstrate inhibitor · the same entry in another collection · chain A against A, TM-score 1.00
  • P22734 · AlphaFold monomer V2.0 prediction for catechol O-methyltransferase (P22734) · a predicted model of the same protein · chain A against A, TM-score 1.00

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