MolNFT v2 · #126383 · protein
Salmonella effector SpvD - G161 variant
5LQ7: “Salmonella effector SpvD - G161 variant”. X-ray diffraction at 1.6, 2 ligands (NA, CL). MolNFT v2 #126383 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5LQ7
- Type
- protein
- Length
- 206 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.6
- Source
- Salmonella enterica
- UniProt
- P0A2N2
- Ligands
- NA, CL
Structure
x-ray diffraction · resolution 1.6 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 206 | — | P0A2N2 |
Ligands and binding sites
- NA · Sodium ion · metal · 2 copies · chains A
- CL · Chloride ion · ion · chains A
- TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol · additive · chains A
- PEG · Di(hydroxyethyl)ether · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5LQ7 · Salmonella effector spvd - G161 variant · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0A2N2
- Elsewhere: RCSB PDB 5LQ7 · PDBe 5LQ7 · UniProt P0A2N2
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.