MolNFT v2 · #124514 · protein
Sidekick-1 immunoglobulin domains 1-5
5K6W: “Sidekick-1 immunoglobulin domains 1-5”. X-ray diffraction at 3.5, 3 ligands (NAG, FUC, SO4). MolNFT v2 #124514 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5K6W
- Type
- protein
- Length
- 950 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 3.5
- Source
- Mus musculus
- UniProt
- Q3UH53
- Ligands
- NAG, FUC, SO4
Structure
x-ray diffraction · resolution 3.5 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 475 | — | Q3UH53 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 11 copies · chains A, B
- FUC · alpha-L-fucopyranose · sugar · 2 copies · chains A, B
- SO4 · Sulfate ion · ion · 3 copies · chains A, B
- GOL · Glycerol · additive · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5K6W · Sidekick-1 immunoglobulin domains 1-5 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q3UH53
- Elsewhere: RCSB PDB 5K6W · PDBe 5K6W · UniProt Q3UH53
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