MolNFT v2 · #121134 · protein
Crystal structure of lavandulyl diphosphate synthase from Lavandula x intermedia in complex with S-thiolo-isopentenyldiphosphate
5HC7: “Crystal structure of lavandulyl diphosphate synthase from Lavandula x intermedia in complex with…”. X-ray diffraction at 2.05, 2 ligands (DST, MG). MolNFT v2 #121134 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5HC7
- Type
- protein
- Length
- 230 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.05
- Source
- Lavandula lanata
- Ligands
- DST, MG
Structure
x-ray diffraction · resolution 2.05 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 230 | — | — |
Ligands and binding sites
- DST · Dimethylallyl S-thiolodiphosphate · ligand · 2 copies · chains A
- MG · Magnesium ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5HC7 · Crystal structure of lavandulyl diphosphate synthase from lavandula X intermedia in… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 5HC7 · PDBe 5HC7
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