MolNFT v2 · #118234 · protein
Molecular basis for antibody-mediated neutralization of New World hemorrhagic fever mammarenaviruses
5EN2: “Molecular basis for antibody-mediated neutralization of New World hemorrhagic fever mammarenaviruses”. X-ray diffraction at 1.821, 4 ligands (NAG, MAN, BMA). MolNFT v2 #118234 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 5EN2
- Type
- protein
- Length
- 572 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.821
- Source
- Junin mammarenavirus; Mus musculus
- UniProt
- P26313
- Ligands
- NAG, MAN, BMA, CL
Structure
x-ray diffraction · resolution 1.821 · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 219 | — | — |
| B | — | protein | 212 | — | — |
| C | — | protein | 141 | — | P26313 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 5 copies · chains C, B
- MAN · alpha-D-mannopyranose · sugar · 4 copies · chains B
- BMA · beta-D-mannopyranose · sugar · chains B
- CL · Chloride ion · ion · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5EN2 · Molecular basis for antibody-mediated neutralization of new world hemorrhagic fever… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P26313
- Elsewhere: RCSB PDB 5EN2 · PDBe 5EN2 · UniProt P26313
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