MolNFT v2 · #117037 · protein
t1555 loop variant
5DN0 · beta1 t1555 loop variant: “t1555 loop variant”. X-ray diffraction at 4.4, 1 pocket (best druggability 0.77). MolNFT v2 #117037 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5DN0
- Type
- protein
- Length
- 221 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 4.4
- Source
- synthetic construct
- Molecule
- beta1 t1555 loop variant
- Pockets
- 1 · best druggability 0.77
Structure
x-ray diffraction · resolution 4.4 · 1 distinct chain · 11% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | beta1 t1555 loop variant | protein | 221 | 11% helix, 19% strand | — |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 141 | 0.77 | 0.93 | 36 | empty |
Compared structures
- 5DN0 · T1555 loop variant · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 5DN0 · PDBe 5DN0
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