MolNFT v2 · #116978 · protein
Crystal structure of Acinetobacter baumannii OccAB2
5DL6 · Putative porin for vanillate trafficking (VanP): “Crystal structure of Acinetobacter baumannii OccAB2”. X-ray diffraction at 2.9, 2 pockets (best druggability 0.76). MolNFT v2 #116978 on GenesisL1: 3D structure, binding sites and…
- PDB
- 5DL6
- Type
- protein
- Length
- 395 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.9
- Source
- Acinetobacter baumannii AB307-0294
- Molecule
- Putative porin for vanillate trafficking (VanP)
- UniProt
- A0A0E4HLL9
- Pockets
- 2 · best druggability 0.76
Structure
x-ray diffraction · resolution 2.9 · 1 distinct chain · 3% helix, 58% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative porin for vanillate trafficking (VanP) | protein | 395 | 3% helix, 58% strand | A0A0E4HLL9 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1133 | 0.76 | 0.78 | 116 | empty |
| 2 | 142 | 0.43 | 0.75 | 23 | empty |
Compared structures
- 5DL6 · Crystal structure of acinetobacter baumannii OCCAB2 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0E4HLL9
- Elsewhere: RCSB PDB 5DL6 · PDBe 5DL6 · UniProt A0A0E4HLL9
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