MolNFT v2 · #116967 · protein
C-terminal His tagged apPOL exonuclease mutant
5DKU: “C-terminal His tagged apPOL exonuclease mutant”. X-ray diffraction at 2.9, 1 ligand (MG). MolNFT v2 #116967 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5DKU
- Type
- protein
- Length
- 1,158 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.9
- Source
- Plasmodium falciparum (isolate 3D7)
- UniProt
- Q8ILY1
- Ligands
- MG
Structure
x-ray diffraction · resolution 2.9 · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 577 | — | Q8ILY1 |
| B | — | protein | 581 | — | Q8ILY1 |
Ligands and binding sites
- MG · Magnesium ion · metal · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5DKU · C-terminal his tagged appol exonuclease mutant · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8ILY1
- Elsewhere: RCSB PDB 5DKU · PDBe 5DKU · UniProt Q8ILY1
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