MolNFT v2 · #116911 · protein
Crystal structure of the ornithine aminotransferase from Toxoplasma gondii ME49 in a complex with gabaculine
5DJ9: “Crystal structure of the ornithine aminotransferase from Toxoplasma gondii ME49 in a complex with gabaculine”. X-ray diffraction at 1.55, 2 ligands (PXG, SO4). MolNFT v2 #116911 on GenesisL1: 3D structure, binding sites and pockets…
- PDB
- 5DJ9
- Type
- protein
- Length
- 842 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.55
- Source
- Toxoplasma gondii ME49
- UniProt
- S8EY38
- Ligands
- PXG, SO4
Structure
x-ray diffraction · resolution 1.55 · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 421 | — | S8EY38 |
| B | — | protein | 421 | — | S8EY38 |
Ligands and binding sites
- PXG · 3-[O-phosphonopyridoxyl]--amino-benzoic acid · ligand · 2 copies · chains A, B
- SO4 · Sulfate ion · ion · 8 copies · chains A, B
- TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol · additive · 2 copies · chains A, B
- BTB · 2-[bis-(2-hydroxy-ethyl)-amino]-2-hydroxymethyl-propane-1,3-diol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5DJ9 · Crystal structure of the ornithine aminotransferase from toxoplasma gondii ME49 in a… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt S8EY38
- Elsewhere: RCSB PDB 5DJ9 · PDBe 5DJ9 · UniProt S8EY38
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