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MolNFT v2 · #116903 · protein

Structure of the PLP-Dependent L-Arginine Hydroxylase MppP Holoenzyme

5DJ1: “Structure of the PLP-Dependent L-Arginine Hydroxylase MppP Holoenzyme”. X-ray diffraction at 2.102, 2 ligands (MG, CL). MolNFT v2 #116903 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
5DJ1
Type
protein
Length
1,421 residues
Chains
4
Method
x-ray diffraction
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
2.102
Source
Streptomyces wadayamensis
Ligands
MG, CL

Structure

x-ray diffraction · resolution 2.102 · 3 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein351——
B, C—protein353——
D—protein364——

Ligands and binding sites

  • MG · Magnesium ion · metal · chains B
  • CL · Chloride ion · ion · 4 copies · chains A, B, C, D

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5DJ1 · Structure of the plp-dependent L-arginine hydroxylase mppp holoenzyme · the same entry in another collection · chain A against A, TM-score 1.00

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