MolNFT v2 · #116901 · protein
Crystal Structure of nuclear proteinaceous RNase P 2 (PRORP2) from A. thaliana
5DIZ: “Crystal Structure of nuclear proteinaceous RNase P 2 (PRORP2) from A. thaliana”. X-ray diffraction at 3.2, 1 ligand (ZN). MolNFT v2 #116901 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5DIZ
- Type
- protein
- Length
- 946 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 3.2
- Source
- Arabidopsis thaliana
- UniProt
- Q680B9
- Ligands
- ZN
Structure
x-ray diffraction · resolution 3.2 · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 474 | — | Q680B9 |
| B | — | protein | 472 | — | Q680B9 |
Ligands and binding sites
- ZN · Zinc ion · metal · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5DIZ · Crystal structure of nuclear proteinaceous RNase P 2 (PRORP2) from a. thaliana · the same entry in another collection · chain A against A, TM-score 1.00
- Q680B9 · AlphaFold monomer V2.0 prediction for proteinaceous RNase P 2 (Q680B9) · a predicted model of the same protein · chain B against A, TM-score 0.94
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q680B9
- Elsewhere: RCSB PDB 5DIZ · PDBe 5DIZ · UniProt Q680B9
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