MolNFT v2 · #114653 · protein

Crystal structure of the C-terminal domain of TagH

5BND · ABC transporter, ATP-binding protein: “Crystal structure of the C-terminal domain of TagH”. X-ray diffraction at 2.68, 1 pocket (best druggability 0.69). MolNFT v2 #114653 on GenesisL1: 3D structure, binding sites and pockets in…

PDB: 5BND
Type: protein
Length: 537 residues
Chains: 3
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 2.68
Source: Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
Molecule: ABC transporter, ATP-binding protein
UniProt: Q5HN63
Pockets: 1 · best druggability 0.69

Structure

x-ray diffraction · resolution 2.68 · 1 distinct chain · 15% helix, 42% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B, C	ABC transporter, ATP-binding protein	protein	179	15% helix, 42% strand	Q5HN63

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	742	0.69	0.76	82	empty

Interfaces

3 interfaces between chains.

A–B · 866 Å² buried · 9 hydrogen bonds · protein-protein
B–C · 850 Å² buried · 9 hydrogen bonds · protein-protein
A–C · 29 Å² buried · 0 hydrogen bonds · protein-protein

Compared structures

5BND · Crystal structure of the C-terminal domain of tagh · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q5HN63
Elsewhere: RCSB PDB 5BND · PDBe 5BND · UniProt Q5HN63

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