MolNFT v1 · #99849 · protein

The crystal structure of acyltransferase in complex with decanoyl-CoA

4MFZ · DBV8 protein: “The crystal structure of acyltransferase in complex with decanoyl-CoA”. X-ray diffraction, 3 ligands (MFK, NA, SO4), 1 pocket (best druggability 0.74). MolNFT v1 #99849 on GenesisL1: 3D structure, binding sites and…

PDB: 4MFZ
Type: protein
Length: 319 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: DBV8 protein
EC: 2.3.1.-
UniProt: Q7WZ83
Ligands: MFK, NA, SO4
Pockets: 1 · best druggability 0.74

Structure

x-ray diffraction · 1 distinct chain · 53% helix, 11% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	DBV8 protein (EC 2.3.1.-)	protein	319	53% helix, 11% strand	Q7WZ83

Ligands and binding sites

MFK · decanoyl-CoA · ligand · chains A
NA · Sodium ion · metal · chains A
SO4 · Sulfate ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	741	0.74	0.79	66	MFK

Compared structures

4MFZ · The crystal structure of acyltransferase in complex with decanoyl-CoA · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q7WZ83
Elsewhere: RCSB PDB 4MFZ · PDBe 4MFZ · UniProt Q7WZ83

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