MolNFT v1 · #99691 · protein
The structure of mall mutant enzyme V200S from bacillus subtilus
4MAZ · Oligo-1,6-glucosidase 1: “The structure of mall mutant enzyme V200S from bacillus subtilus”. X-ray diffraction, 1 ligand (MG), 3 pockets (best druggability 0.81). MolNFT v1 #99691 on GenesisL1: 3D structure, binding sites and…
- PDB
- 4MAZ
- Type
- protein
- Length
- 559 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Oligo-1,6-glucosidase 1
- EC
- 3.2.1.10
- UniProt
- O06994
- Ligands
- MG
- Pockets
- 3 · best druggability 0.81
Structure
x-ray diffraction · 1 distinct chain · 34% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Oligo-1,6-glucosidase 1 (EC 3.2.1.10) | protein | 559 | 34% helix, 18% strand | O06994 |
Ligands and binding sites
- MG · Magnesium ion · metal · chains A
- GOL · Glycerol · additive · 2 copies · chains A
- TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 720 | 0.81 | 0.85 | 62 | TRS, GOL |
| 2 | 90 | 0.37 | 0.76 | 22 | empty |
| 3 | 73 | 0.31 | 0.74 | 18 | empty |
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O06994
- Elsewhere: RCSB PDB 4MAZ · PDBe 4MAZ · UniProt O06994
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