MolNFT v1 · #99265 · protein
Crystal structure of the S105A mutant of a C-C hydrolase, DXNB2 from sphingomonas wittichii RW1
4LYD · Mcp hydrolase: “Crystal structure of the S105A mutant of a C-C hydrolase, DXNB2 from sphingomonas wittichii RW1”. X-ray diffraction, 1 pocket (best druggability 0.65). MolNFT v1 #99265 on GenesisL1: 3D structure, binding sites and…
- PDB
- 4LYD
- Type
- protein
- Length
- 268 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Mcp hydrolase
- EC
- 3.7.1.8
- UniProt
- A5VAT9
- Pockets
- 1 · best druggability 0.65
Structure
x-ray diffraction · 1 distinct chain · 43% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Mcp hydrolase (EC 3.7.1.8) | protein | 268 | 43% helix, 19% strand | A5VAT9 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 292 | 0.65 | 0.81 | 35 | empty |
Compared structures
- 4LYD · Crystal structure of the S105A mutant of a C-C hydrolase, DxnB2 from Sphingomonas… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A5VAT9
- Elsewhere: RCSB PDB 4LYD · PDBe 4LYD · UniProt A5VAT9
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