MolNFT v1 · #99063 · protein
Ion selectivity of ompf soaked in 0.1M kbr
4LSF · Outer membrane protein F: “Ion selectivity of ompf soaked in 0.1M kbr”. X-ray diffraction, 1 ligand (BR), 5 pockets (best druggability 0.69). MolNFT v1 #99063 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4LSF
- Type
- protein
- Length
- 678 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Outer membrane protein F
- UniProt
- P02931
- Ligands
- BR
- Pockets
- 5 · best druggability 0.69
Structure
x-ray diffraction · 1 distinct chain · 4% helix, 61% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Outer membrane protein F | protein | 339 | 4% helix, 61% strand | P02931 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 909 | 0.69 | 0.74 | 65 | GOL, BR |
| 2 | 843 | 0.69 | 0.75 | 63 | BR, GOL |
| 3 | 206 | 0.49 | 0.75 | 26 | empty |
| 4 | 233 | 0.46 | 0.73 | 34 | empty |
| 5 | 187 | 0.42 | 0.73 | 26 | empty |
Interfaces
1 interface between chains.
- A–B · 614 Ų buried · 0 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P02931
- Elsewhere: RCSB PDB 4LSF · PDBe 4LSF · UniProt P02931
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