MolNFT v1 · #98654 · protein

Crystal structure of escherichia COLI sdia in the space group C2

4LFU · Regulatory protein sdia: “Crystal structure of escherichia COLI sdia in the space group C2”. X-ray diffraction, 1 ligand (CL), 1 pocket (best druggability 0.80). MolNFT v1 #98654 on GenesisL1: 3D structure, binding sites and pockets…

PDB: 4LFU
Type: protein
Length: 236 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Regulatory protein sdia
UniProt: P07026
Ligands: CL
Pockets: 1 · best druggability 0.80

Structure

x-ray diffraction · 1 distinct chain · 53% helix, 14% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Regulatory protein sdia	protein	236	53% helix, 14% strand	P07026

Ligands and binding sites

CL · Chloride ion · ion · 2 copies · chains A
PG4 · Tetraethylene glycol · additive · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	327	0.80	0.90	33	PG4

Compared structures

4LFU · Crystal structure of Escherichia coli SdiA in the space group C2 · the same entry in another collection · chain A against A, TM-score 1.00
P07026 · AlphaFold monomer V2.0 prediction for regulatory protein sdia (P07026) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P07026
Elsewhere: RCSB PDB 4LFU · PDBe 4LFU · UniProt P07026

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