MolNFT v1 · #98308 · DNA
Crystal structure of the complex of DNA hexamer D(CGATCG) with coptisine
4L5K · DNA (5'-D(*CP*GP*AP*TP*CP*G)-3'): “Crystal structure of the complex of DNA hexamer D(CGATCG) with coptisine”. X-ray diffraction, 1 ligand (KPT). MolNFT v1 #98308 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4L5K
- Type
- DNA
- Length
- 6 nucleotides
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA (5'-D(*CP*GP*AP*TP*CP*G)-3')
- Ligands
- KPT
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA (5'-D(*CP*GP*AP*TP*CP*G)-3') | dna | 6 | — | — |
Ligands and binding sites
- KPT · 6,7-dihydro[1,3]dioxolo[4,5-g][1,3]dioxolo[7,8]isoquino[3,2-a]isoquinolin-5-ium · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 4L5K · Crystal structure of the complex of DNA hexamer d(CGATCG) with Coptisine · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 4L5K · PDBe 4L5K
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