MolNFT v1 · #98034 · protein
Crystal structure of a putative lipoprotein (CC_3750) from caulobacter crescentus CB15 at 2.40 a resolution
4KWY · Putative uncharacterized protein: “Crystal structure of a putative lipoprotein (CC_3750) from caulobacter crescentus CB15 at 2.40 a resolution”. X-ray diffraction, 2 ligands (CL, PO4), 3 pockets (best druggability 0.65). MolNFT v1…
- PDB
- 4KWY
- Type
- protein
- Length
- 269 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative uncharacterized protein
- UniProt
- Q9A216
- Ligands
- CL, PO4
- Pockets
- 3 · best druggability 0.65
Structure
x-ray diffraction · 2 distinct chains · 43% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative uncharacterized protein | protein | 137 | 42% helix, 31% strand | Q9A216 |
| B | Putative uncharacterized protein | protein | 132 | 45% helix, 30% strand | Q9A216 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 257 | 0.65 | 0.82 | 35 | CL |
| 2 | 107 | 0.49 | 0.81 | 24 | empty |
| 3 | 62 | 0.33 | 0.76 | 14 | empty |
Interfaces
1 interface between chains.
- A–B · 738 Ų buried · 12 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 2 modified (engineered).
Compared structures
- 4KWY · Crystal structure of a putative lipoprotein (CC_3750) from Caulobacter crescentus CB15 at… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9A216
- Elsewhere: RCSB PDB 4KWY · PDBe 4KWY · UniProt Q9A216
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