MolNFT v1 · #98004 · protein
Crystal structure of a putative uncharacterized protein (BDI_1873) from parabacteroides distasonis atcc 8503 at 2.32 a resolution
4KW2: “Crystal structure of a putative uncharacterized protein (BDI_1873) from parabacteroides distasonis atcc 8503…”. X-ray diffraction, 1 ligand (SO4), 3 pockets (best druggability 0.56). MolNFT v1 #98004 on GenesisL1: 3D structure…
- PDB
- 4KW2
- Type
- protein
- Length
- 240 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Uncharacterized protein
- UniProt
- A6LD44
- Ligands
- SO4
- Pockets
- 3 · best druggability 0.56
Structure
x-ray diffraction · 1 distinct chain · 40% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Uncharacterized protein | protein | 240 | 40% helix, 18% strand | A6LD44 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 221 | 0.56 | 0.79 | 41 | empty |
| 2 | 99 | 0.38 | 0.76 | 17 | empty |
| 3 | 50 | 0.37 | 0.80 | 17 | empty |
Modifications
Observed in the structure: 5 modified (engineered).
Compared structures
- 4KW2 · Crystal structure of a Putative uncharacterized protein (BDI_1873) from Parabacteroides… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A6LD44
- Elsewhere: RCSB PDB 4KW2 · PDBe 4KW2 · UniProt A6LD44
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