MolNFT v1 · #98001 · protein

Crystal structure of the plantazolicin methyltransferase baml in complex with sah

4KVZ: “Crystal structure of the plantazolicin methyltransferase baml in complex with sah”. X-ray diffraction, 1 ligand (SAH), 1 pocket (best druggability 0.80). MolNFT v1 #98001 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 4KVZ
Type: protein
Length: 269 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Baml
EC: 2.1.1.-
UniProt: D3VMM1
Ligands: SAH
Pockets: 1 · best druggability 0.80

Structure

x-ray diffraction · 1 distinct chain · 51% helix, 19% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Baml (EC 2.1.1.-)	protein	269	51% helix, 19% strand	D3VMM1

Ligands and binding sites

SAH · S-adenosyl-L-homocysteine · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	526	0.80	0.86	75	SAH

Compared structures

4KVZ · Crystal structure of the plantazolicin methyltransferase BamL in complex with SAH · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt D3VMM1
Elsewhere: RCSB PDB 4KVZ · PDBe 4KVZ · UniProt D3VMM1

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