MolNFT v1 · #97245 · protein
Crystal structure of lv-ranaspumin (lv-rsn-1) from the foam nest of leptodactylus vastus, monoclinic crystal form
4K82: “Crystal structure of lv-ranaspumin (lv-rsn-1) from the foam nest of leptodactylus vastus, monoclinic crystal…”. X-ray diffraction, 2 pockets (best druggability 0.40). MolNFT v1 #97245 on GenesisL1: 3D structure, binding sites and…
- PDB
- 4K82
- Type
- protein
- Length
- 205 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Lv-ranaspumin (lv-rsn-1)
- Pockets
- 2 · best druggability 0.40
Structure
x-ray diffraction · 1 distinct chain · 68% helix, 4% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Lv-ranaspumin (lv-rsn-1) | protein | 205 | 68% helix, 4% strand | — |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 79 | 0.40 | 0.78 | 19 | empty |
| 2 | 103 | 0.38 | 0.75 | 16 | empty |
Modifications
Observed in the structure: 4 disulfide (disulfide).
Compared structures
- 4K82 · Crystal structure of lv-ranaspumin (Lv-RSN-1) from the foam nest of Leptodactylus vastus… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 4K82 · PDBe 4K82
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