MolNFT v1 · #97215 · protein
Cftr associated ligand (cal) E317A PDZ domain bound to peptide ICAL36- qdtrl (ansrwqdtrl)
4K78 · Golgi-associated PDZ and coiled-coil motif-containing…: “Cftr associated ligand (cal) E317A PDZ domain bound to peptide ICAL36- qdtrl (ansrwqdtrl)”. X-ray diffraction. MolNFT v1 #97215 on GenesisL1: 3D structure, binding sites and…
- PDB
- 4K78
- Type
- protein
- Length
- 97 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Golgi-associated PDZ and coiled-coil motif-containing protein; ICAL36-qdtrl peptide
- UniProt
- Q9HD26
Structure
x-ray diffraction · 2 distinct chains · 18% helix, 40% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Golgi-associated PDZ and coiled-coil motif-containing protein | protein | 87 | 20% helix, 41% strand | Q9HD26 |
| B | ICAL36-qdtrl peptide | protein | 10 | 0% helix, 30% strand | — |
Interfaces
1 interface between chains.
- A–B · 622 Ų buried · 15 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 1 modified (nonstandard).
Compared structures
- 4K78 · CFTR Associated Ligand (CAL) E317A PDZ domain bound to peptide iCAL36-QDTRL (ANSRWQDTRL) · the same entry in another collection · chain A against A, TM-score 1.00
- Q9HD26 · AlphaFold monomer V2.0 prediction for golgi-associated PDZ and coiled-coil… · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9HD26
- Elsewhere: RCSB PDB 4K78 · PDBe 4K78 · UniProt Q9HD26
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