MolNFT v1 · #96953 · protein

Crystal structure of co ion substituted SOD2 from clostridium difficile

4JZ2 · Superoxide dismutase: “Crystal structure of co ion substituted SOD2 from clostridium difficile”. X-ray diffraction, 1 ligand (CO), 1 pocket (best druggability 0.34). MolNFT v1 #96953 on GenesisL1: 3D structure, binding sites and…

PDB: 4JZ2
Type: protein
Length: 202 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Superoxide dismutase
EC: 1.15.1.1
UniProt: Q186I6
Ligands: CO
Pockets: 1 · best druggability 0.34

Structure

x-ray diffraction · 1 distinct chain · 55% helix, 11% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Superoxide dismutase (EC 1.15.1.1)	protein	202	55% helix, 11% strand	Q186I6

Ligands and binding sites

CO · Cobalt (II) ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	99	0.34	0.73	21	empty

Compared structures

4JZ2 · Crystal structure of Co ion substituted SOD2 from Clostridium difficile · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q186I6
Elsewhere: RCSB PDB 4JZ2 · PDBe 4JZ2 · UniProt Q186I6

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