MolNFT v1 · #96616 · protein
Structural study of bacillus subtilis hmob in complex with heme
4JOU · Putative uncharacterized protein yhgc: “Structural study of bacillus subtilis hmob in complex with heme”. X-ray diffraction, 1 ligand (HEM), 2 pockets (best druggability 0.64). MolNFT v1 #96616 on GenesisL1: 3D structure, binding…
- PDB
- 4JOU
- Type
- protein
- Length
- 155 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative uncharacterized protein yhgc
- UniProt
- E0TXX3
- Ligands
- HEM
- Pockets
- 2 · best druggability 0.64
Structure
x-ray diffraction · 1 distinct chain · 20% helix, 41% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative uncharacterized protein yhgc | protein | 155 | 20% helix, 41% strand | E0TXX3 |
Ligands and binding sites
- HEM · Protoporphyrin IX containing Fe · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 256 | 0.64 | 0.81 | 31 | HEM |
| 2 | 53 | 0.28 | 0.75 | 15 | empty |
Compared structures
- 4JOU · Structural study of Bacillus subtilis HmoB in complex with heme · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt E0TXX3
- Elsewhere: RCSB PDB 4JOU · PDBe 4JOU · UniProt E0TXX3
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