MolNFT v1 · #96576 · protein
Crystal structure of a putative transcriptional regulator from saccharomonospora viridis in complex with benzamidine
4JNN: “Crystal structure of a putative transcriptional regulator from saccharomonospora viridis in complex with…”. X-ray diffraction, 1 ligand (BEN), 1 pocket (best druggability 0.74). MolNFT v1 #96576 on GenesisL1: 3D structure, binding…
- PDB
- 4JNN
- Type
- protein
- Length
- 191 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Transcriptional regulator
- UniProt
- C7MT25
- Ligands
- BEN
- Pockets
- 1 · best druggability 0.74
Structure
x-ray diffraction · 1 distinct chain · 77% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transcriptional regulator | protein | 191 | 77% helix, 1% strand | C7MT25 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 152 | 0.74 | 0.92 | 24 | BEN |
Modifications
Observed in the structure: 2 modified, 1 covalent (engineered, additive adduct).
Compared structures
- 4JNN · Crystal structure of a putative transcriptional regulator from Saccharomonospora viridis… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C7MT25
- Elsewhere: RCSB PDB 4JNN · PDBe 4JNN · UniProt C7MT25
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.