MolNFT v1 · #96530 · protein

Crystal structure of cytochrome C peroxidase W191G-gateless in complex with 3-fluorocatechol

4JMA: “Crystal structure of cytochrome C peroxidase W191G-gateless in complex with 3-fluorocatechol”. X-ray diffraction, 2 ligands (3FA, HEM), 2 pockets (best druggability 0.81). MolNFT v1 #96530 on GenesisL1: 3D structure, binding sites…

PDB: 4JMA
Type: protein
Length: 289 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Cytochrome C peroxidase
EC: 1.11.1.5
UniProt: B3LRE1
Ligands: 3FA, HEM
Pockets: 2 · best druggability 0.81

Structure

x-ray diffraction · 1 distinct chain · 51% helix, 10% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Cytochrome C peroxidase (EC 1.11.1.5)	protein	289	51% helix, 10% strand	B3LRE1

Ligands and binding sites

3FA · 3-fluorobenzene-1,2-diol · ligand · 2 copies · chains A
HEM · Protoporphyrin IX containing Fe · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	385	0.81	0.90	51	HEM, 3FA
2	111	0.41	0.76	23	empty

Compared structures

4JMA · Crystal structure of Cytochrome C Peroxidase W191G-Gateless in complex with… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt B3LRE1
Elsewhere: RCSB PDB 4JMA · PDBe 4JMA · UniProt B3LRE1

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