MolNFT v1 · #9644 · protein
E. COLI enoyl reductase +NAD+SB385826
1I30 · Enoyl-[acyl-carrier-protein] reductase [NADH]: “E. COLI enoyl reductase +NAD+SB385826”. X-ray diffraction, 2 ligands (NAD, 826), 5 pockets (best druggability 0.69). MolNFT v1 #9644 on GenesisL1: 3D structure, binding sites and…
- PDB
- 1I30
- Type
- protein
- Length
- 496 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Enoyl-[acyl-carrier-protein] reductase [NADH]
- EC
- 1.3.1.9
- UniProt
- P29132
- Ligands
- NAD, 826
- Pockets
- 5 · best druggability 0.69
Structure
x-ray diffraction · 1 distinct chain · 50% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9) | protein | 248 | 50% helix, 15% strand | P29132 |
Ligands and binding sites
- NAD · Nicotinamide-adenine-dinucleotide · ligand · 2 copies · chains A, B
- 826 · 1,3,4,9-tetrahydro-2-(hydroxybenzoyl)-9-[(4-hydroxyphenyl)methyl]-6-methoxy-2H-pyrido[3,4-b]indole · ligand · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 495 | 0.69 | 0.79 | 41 | NAD, 826 |
| 2 | 520 | 0.68 | 0.78 | 39 | NAD, 826 |
| 3 | 83 | 0.39 | 0.78 | 14 | empty |
| 4 | 59 | 0.38 | 0.79 | 18 | empty |
| 5 | 61 | 0.33 | 0.76 | 17 | empty |
Interfaces
1 interface between chains.
- A–B · 1709 Ų buried · 45 hydrogen bonds · protein-protein
Compared structures
- 1I30 · E. Coli Enoyl Reductase +NAD+SB385826 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P29132
- Elsewhere: RCSB PDB 1I30 · PDBe 1I30 · UniProt P29132
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