MolNFT v1 · #95850 · protein

Crystal structure of luxf from photobacterium leiognathi

4J2P · Non-fluorescent flavoprotein: “Crystal structure of luxf from photobacterium leiognathi”. X-ray diffraction, 3 pockets (best druggability 0.46). MolNFT v1 #95850 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 4J2P
Type: protein
Length: 225 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Non-fluorescent flavoprotein
UniProt: P09142
Pockets: 3 · best druggability 0.46

Structure

x-ray diffraction · 1 distinct chain · 49% helix, 19% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Non-fluorescent flavoprotein	protein	225	49% helix, 19% strand	P09142

Pockets

3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	92	0.46	0.80	15	empty
2	100	0.38	0.76	18	empty
3	62	0.33	0.76	14	empty

Compared structures

4J2P · Crystal structure of LuxF from Photobacterium leiognathi · the same entry in another collection · chain A against A, TM-score 1.00
P09142 · AlphaFold monomer V2.0 prediction for non-fluorescent flavoprotein (P09142) · a predicted model of the same protein · chain A against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P09142
Elsewhere: RCSB PDB 4J2P · PDBe 4J2P · UniProt P09142

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