MolNFT v1 · #95589 · protein
MIF4G domain of DAP5
4IUL · Eukaryotic translation initiation factor 4 gamma 2: “MIF4G domain of DAP5”. X-ray diffraction, 1 ligand (SO4), 3 pockets (best druggability 0.70). MolNFT v1 #95589 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4IUL
- Type
- protein
- Length
- 469 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Eukaryotic translation initiation factor 4 gamma 2
- UniProt
- P78344
- Ligands
- SO4
- Pockets
- 3 · best druggability 0.70
Structure
x-ray diffraction · 2 distinct chains · 72% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Eukaryotic translation initiation factor 4 gamma 2 | protein | 235 | 73% helix, 0% strand | P78344 |
| B | Eukaryotic translation initiation factor 4 gamma 2 | protein | 234 | 72% helix, 0% strand | P78344 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 5 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 577 | 0.70 | 0.79 | 64 | empty |
| 2 | 110 | 0.53 | 0.83 | 23 | empty |
| 3 | 57 | 0.28 | 0.74 | 14 | empty |
Interfaces
1 interface between chains.
- A–B · 1327 Ų buried · 16 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P78344
- Elsewhere: RCSB PDB 4IUL · PDBe 4IUL · UniProt P78344
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